Very interesting set of posts Scott - as usual.
Rocketeer55, this is what would worry be on a re-build - the forces generated to bust that crank were pretty high, there is damage to a lot of components from top to bottom, some components might have stress damage that is not immediately evident but be re-used, this may have been caused or at least made worse by the very techs who are going to do the rebuild
. For these reasons alone I would fight tooth and nail to get the motor replaced with a new one, even if it took longer.
If this happened to me and the engine wasn't replaced, all trust I had in the bike would be over and it would have to go anyway.