I know, bone stock, and almost no matter what tune I use I could get minor back fires through the intake. It happened on day 1 of owning the bike, on the way back from the dealer even. For a short time it went away but I could not figure out specifically fixed it.
So having built and dynod my own tunes, it's the one thing I could not get rid of that annoyed me.....until today!!!
I started snooping around my tunes trying to find the common thread that connected them all. It came down to one thing, I had always used the 20776 ignition tables as my basis, including the 20776 neutral position map or copied over the i3 ignition map into the neutral area.
On a guess, I threw the 20773 neutral ignition map in my most recent revision, BUT I also happened to copy over certain areas of the 20776 L table to adjust acceleration enrichment, for a totally different reason than the backfires. I can't trigger the intake backfiring even if I try repeatedly. Time will tell, but, it seems the intake backfires are triggered by too much ignition advance at 2000 RPM and under at 20% or less throttle and too rich L tables over 880 mpa, a result of basing my L tables on the 20773 map.
In the end, at least for me, using the whole 4 right most columns in L tables and the whole 20773 Ignition Neutral table has 100% eliminated the backfires
I'll do up a custom 20773+20776 hybrid appropriate for a stock bike for people to try if they are getting the occasional intake backfire. On a stock bike you'll feel it under your bum as a sharp pop with a fairly loud report, with K&N or RAMAIR you'll feel the thumpain on your left leg if it goes off.