Do a search on the R3Owners forums, as well as the Rat forum for tuneboy, tuneEdit, and TuneECU. There is a good amount of information on mapping with TuneECU and TuneEdit on other forums for Daytona 675, Speed Triple, Tiger, and Bonneville/Thruxton as well as for KTM, Ducati, and Aprilia models. The Daytona and Speed Triple 955cc models use the Sagem ECU and this differs considerably from the Keihin bikes.
Compared to the tuning solutions and interface software for automotive use, or aftermarket engine management, TuneECU and TuneEdit are fairly simple if you've ever mapped a car with individual runner throttle bodies (IR or ITB). With less access to tables - especially sensor tables, acceleration compensation, injector timing, coil dwell, etc., etc.. And no cam sensor to consider.
The "L" tables are MAP based, the "F" tables are TPS based. Different maps allow differing control of ignition mapping based on MAP and TPS. The "F_L Switch" sets MAP/TPS priority at different engine speeds - same as any other setup for Alpha-n with IR throttles. The AFR table is discussed in posts above. The Idle table is engine speed at differing engine temps in °C.
You also have the ability to adjust speed limits, rev limits, secondary throttle opening, speedo corrections, fan thermostat switch, and more.
Different maps and different models allow differing amounts of control of other features - exhaust throttle (ExUp valve), intake flap valves, Lambda sensor, SAI servo, etc.
I hope this helps.