Well yes and no. I had a friend download the tune on my 2007 R3 Classic years ago and when I tried to download one onto my 2009 Touring, I couldn't get my computer to talk to my ECU, which apparently has been a problem at time. Fortunately, Claviger had come over and brought his laptop with him. We transferred the tune to his laptop and he successfully downloaded it after making a few modifications to it, something I would not have been able to do.
The big advantages with Tune ECU is that it is free and flexible, that is, you can modify the tune you download if it is "not quite right". You must get a cable and download the cable drivers first, then download the desired tune.
With the Dobek you are buying a controller but it is stupidly easy to install and set. It comes with recommended initial settings but those can be modified with the push of a few buttons on the controller. Someone told me that Dobek was the original developer of the Power Commander. I don't know how true that is though.